The detailed information of tRNA gene sequence


Sequence ID>WENV180095059
Genome IDMTBK01046086
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 293
End posion on genome 202
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tatttgcaac
tRNA gene sequence 
GGAGAAATGGCAGAGCGGTCGAATGCGGCGGTCTTGAAAACCGTTGTCCTGCTTCCGCGG
GACCGGGGGTTCGAATCCCTCTTTCTCCGCCA
Downstream region at tRNA end position 
gactcatcag
Secondary structure (Cloverleaf model)
>WENV180095059	Ser	TGA
                   c      GCCA gactcatcag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGTCCTGCTTCCGCGGGACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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