The detailed information of tRNA gene sequence


Sequence ID>WENV180095067
Genome IDMTBK01046684
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 94
End posion on genome 20
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
cggcgctttt
tRNA gene sequence 
GGGCCCGTAGCTTAGCCTGGTAGAGCGCCCGGCTCATAACCGGGCGGCCAAGGGTTCAAA
TCCCTTCGGGCCCACaa
Downstream region at tRNA end position 
gttgatctaa
Secondary structure (Cloverleaf model)
>WENV180095067	Ile2	CAT
                   t      ACaa gttgatctaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T T C C C     A
      C G A        A      | | | | |     A
    C       T T C G       A A G G G     C
    T       + | | |                 T T
    G       G A G C
      G T A        G     CGGCC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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