The detailed information of tRNA gene sequence


Sequence ID>WENV180095068
Genome IDMTBK01046695
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 5673
End posion on genome 5600
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
agtgttgatT
tRNA gene sequence 
GGGCGATTAACTCAGCGGGAGAGTGCCACCTTCACACGGTGGAAGTCATTGGTTCGAATC
CAATATCGCCCATac
Downstream region at tRNA end position 
agcactcttt
Secondary structure (Cloverleaf model)
>WENV180095068	Val	CAC
                   T      ATac agcactcttt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     T A A C C     A
        G A        A      | | | | |     G
      C     C T C A       A T T G G     C
      G     | | | |                 T T
      G     G A G T
        G A        G     AAGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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