The detailed information of tRNA gene sequence


Sequence ID>WENV180095079
Genome IDMTBK01047278
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 150
End posion on genome 61
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttcacaggct
tRNA gene sequence 
GGAGGAATGGCCGAGCGGTTGAAGGCGGCGGTCTTGAAAACCGTTAGGGGGGCAACCCCC
TCGTGGGTTCGAATCCTACTTCCTCCGCCA
Downstream region at tRNA end position 
cctatcgccg
Secondary structure (Cloverleaf model)
>WENV180095079	Ser	TGA
                   t      GCCA cctatcgccg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     C A T C C     A
      C G A        G      | | + | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TAGGGGGGCAACCCCCTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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