The detailed information of tRNA gene sequence


Sequence ID>WENV180095084
Genome IDMTBK01047963
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 667
End posion on genome 570
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aagcactcat
tRNA gene sequence 
GGAAGCGCCTCGGTCGCTGGTGGGCCGCCCGGTCTTCAAAACCGGTGTGGGGGGTGAGAA
ACTTCCCAGGTGGGTTCGATTCCCATGCGCTTCCGCCA
Downstream region at tRNA end position 
tattatgctc
Secondary structure (Cloverleaf model)
>WENV180095084	SeC	TCA
                   t      GCCA tattatgctc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     C - G          T T
                    C     T A C C C     A
      C G C        T      + | | | |     G
    T       T G G C       G T G G G     C
    G       + | | |                 T T
    G       G C C G
      T G G        C     TGTGGGGGGTGAGAAACTTCCCAG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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