The detailed information of tRNA gene sequence


Sequence ID>WENV180095087
Genome IDMTBK01048231
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1853
End posion on genome 1777
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ctcgctatca
tRNA gene sequence 
CGGGGCGTGGCGCAGTTTGGTAGCGCGCTTGGTTCGGGACCAAGAGGTCGCAGGTTCAAA
TCCTGTCGCTCCGACCA
Downstream region at tRNA end position 
ttgttttata
Secondary structure (Cloverleaf model)
>WENV180095087	Pro	CGG
                   a      ACCA ttgttttata
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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