The detailed information of tRNA gene sequence


Sequence ID>WENV180095098
Genome IDMTBK01048627
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 420
End posion on genome 495
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cgtcgagcaa
tRNA gene sequence 
GGTCCTGTGGTGCAGTTTGGAGTGCACGCCGCCCTGTCAAGGCGGAGGCCGCGGGTTCAA
ATCCCGTCAGGACCGCga
Downstream region at tRNA end position 
gggcgggtga
Secondary structure (Cloverleaf model)
>WENV180095098	Asp	GTC
                   a      GCga gggcgggtga
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T G C C C     A
    T T G A        G      + | | | |     A
  T         C G T G       G C G G G     C
  G         | | | |                 T T
  G         G C A C
    A G T          G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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