The detailed information of tRNA gene sequence


Sequence ID>WENV180095106
Genome IDMTBK01049193
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 756
End posion on genome 830
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tatacagtat
tRNA gene sequence 
GGCCCCATAGGATAACGGCTAGTCCACCGGATTCTCAGTCCGAGGGTCGGGGTTCGATTC
CCCGTGGGGCTGCCA
Downstream region at tRNA end position 
aatttggaat
Secondary structure (Cloverleaf model)
>WENV180095106	Glu	CTC
                   t      GCCA aatttggaat
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     G C C C C     A
      C A A        A      | | | | |     G
    G       T A G G       C G G G G     C
    G       + | | |                 T T
    C       G T C C
      T A          A     GGGT
                    C   A
                    C - G
                    G - C
                    G - C
                    A - T
                  T       G
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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