The detailed information of tRNA gene sequence


Sequence ID>WENV180095122
Genome IDMTBK01050258
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 51
End posion on genome 127
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
attgttcctc
tRNA gene sequence 
GGGGGCGTGGTGTAGCGGTTTAACATGCGGCCCTGTCAAGGCCGAGATCGCGGGTTCAAA
TCCCGTCGCTCCCGCCA
Downstream region at tRNA end position 
aaaaagctgt
Secondary structure (Cloverleaf model)
>WENV180095122	Asp	GTC
                   c      GCCA aaaaagctgt
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T A
                    T     T G C C C     A
      C G A        G      + | | | |     A
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    T       A C A T
      T T A        G     AGATC
                    C - G
                    G - C
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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