The detailed information of tRNA gene sequence


Sequence ID>WENV180095132
Genome IDMTBK01050766
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 49
End posion on genome 120
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ataggagatt
tRNA gene sequence 
GGCGCCGTACCCAAGCGGTAAGGGAGAGGTCTGCAAAACCTTTATGCATCAGTTCGATTC
TGATCGGCGCCTgtt
Downstream region at tRNA end position 
taagcgtttt
Secondary structure (Cloverleaf model)
>WENV180095132	Cys	GCA
                   t      Tgtt taagcgtttt
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T T
                    T     T A G T C     A
        G A        A      | | | | |     G
      C     A C C C       A T C A G     C
      G       | | |                 T T
      G     A G G G
        T A        A     TATGC
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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