The detailed information of tRNA gene sequence


Sequence ID>WENV180095135
Genome IDMTBK01050896
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 29567
End posion on genome 29492
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
agccataatc
tRNA gene sequence 
GGGATGTTAACTCAGTTGGTTTAGAGTGTCACCTTGACAGGGTGGAAGTCACAGGTTCGA
GTCCTGTACATCCCACaa
Downstream region at tRNA end position 
gataaattct
Secondary structure (Cloverleaf model)
>WENV180095135	Val	GAC
                   c      ACaa gataaattct
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     T - A          T G
                    T     T G T C C     A
    T T G A        A      | | | | |     G
  G         C T C A       A C A G G     C
  G         | | | |                 T T
  T         G A G T
    T T A          G     AAGTC
                    T + G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       G
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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