The detailed information of tRNA gene sequence


Sequence ID>WENV180095137
Genome IDMTBK01050905
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 994
End posion on genome 919
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gcggcgacac
tRNA gene sequence 
GGGCTCTTAGCTCAGCTGGTAGAGCAGCGGACTCTTAATCCGTTGGTCGTAGGTTCGAAT
CCTACAGGGCCCACCA
Downstream region at tRNA end position 
gaaccaacct
Secondary structure (Cloverleaf model)
>WENV180095137	Lys	CTT
                   c      ACCA gaaccaacct
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     T - A          T A
                    T     C A T C C     A
      C G A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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