The detailed information of tRNA gene sequence


Sequence ID>WENV180095139
Genome IDMTBK01051087
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 249
End posion on genome 177
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gcccacatat
tRNA gene sequence 
CGCGGAGTGGAGCAGTGGCAGCTCGTTGGGCTCATAACCCAAAGGTCGCAGGTTCGAGTC
CTGTCTCCGCAACaa
Downstream region at tRNA end position 
gttcaaaaag
Secondary structure (Cloverleaf model)
>WENV180095139	fMet	CAT
                   t      ACaa gttcaaaaag
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T G T C C     A
        G A        G      + | | | |     G
      T     C G A G       G C A G G     C
      G     | | | |                 T T
      G     G C T C
        C A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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