The detailed information of tRNA gene sequence


Sequence ID>WENV180095141
Genome IDMTBK01051348
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 946
End posion on genome 871
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tcccgcaaat
tRNA gene sequence 
GGGGTCATAGCTCAGTTGGTAGAGCGTCTCGTTCGCAATGAGAAGGTCTGGGGTTCGATC
CCCCATGGCTCCACCA
Downstream region at tRNA end position 
tttgcagggt
Secondary structure (Cloverleaf model)
>WENV180095141	Ala	CGC
                   t      ACCA tttgcagggt
                     G - C
                     G - C
                     G + T
                     G - C
                     T + G
                     C - G
                     A - T          C T
                    T     A C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       T G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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