The detailed information of tRNA gene sequence


Sequence ID>WENV180095146
Genome IDMTBK01051380
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 248
End posion on genome 172
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
caccaaaagt
tRNA gene sequence 
GGAACCGTGGTGTAGATGGTTAACACGCCGGCCTGTCACGCCGGAGATCGCGGGTTCGAG
TCCCGTCGGTTCCGCCA
Downstream region at tRNA end position 
tttttttgta
Secondary structure (Cloverleaf model)
>WENV180095146	Asp	GTC
                   t      GCCA tttttttgta
                     G - C
                     G - C
                     A - T
                     A - T
                     C - G
                     C - G
                     G - C          T G
                    T     T G C C C     A
      A G A        G      + | | | |     G
    T       T G T G       G C G G G     C
    G       | | | |                 T T
    G       A C A C
      T T A        G     AGATC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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