The detailed information of tRNA gene sequence


Sequence ID>WENV180095159
Genome IDMTBK01052265
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 347
End posion on genome 271
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tttgcgctac
tRNA gene sequence 
GGGGTCGTAGCTCAATTGGTTAGAGTACCAGACTGTCGATCTGGGTGTTGCGGGTTCAAG
TCCCGTCGACCCCGCCA
Downstream region at tRNA end position 
gaaatcagcg
Secondary structure (Cloverleaf model)
>WENV180095159	Asp	GTC
                   c      GCCA gaaatcagcg
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T G
                    T     T G C C C     A
      T A A        A      + | | | |     A
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     GTGTT
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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