The detailed information of tRNA gene sequence


Sequence ID>WENV180095162
Genome IDMTBK01052335
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 284
End posion on genome 194
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gatttttaga
tRNA gene sequence 
GGAGAGATGGCCGAGCGGCTGAAGGCAGCTGCCTGCTAAGCAGTTGTACTGCCAAAAGCG
GTACCCAGGGTTCGAATCCCTGTCTCTCCGCaa
Downstream region at tRNA end position 
gattttagat
Secondary structure (Cloverleaf model)
>WENV180095162	Ser	GCT
                   a      GCaa gattttagat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     TGTACTGCCAAAAGCGGTACC
                    G + T
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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