The detailed information of tRNA gene sequence


Sequence ID>WENV180095163
Genome IDMTBK01052548
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 367
End posion on genome 278
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gacggatgcg
tRNA gene sequence 
GGAAGCGTGGCCGAGTGGTTGAAGGCACCGGTCTTGAAAACCGGCGAGGGTTCACCCCCT
CCGTGGGTTCGAATCCCACCGCTTCCGCCA
Downstream region at tRNA end position 
gcctcggcgg
Secondary structure (Cloverleaf model)
>WENV180095163	Ser	TGA
                   g      GCCA gcctcggcgg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        A     CGAGGGTTCACCCCCTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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