The detailed information of tRNA gene sequence


Sequence ID>WENV180095173
Genome IDMTBK01053139
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 325
End posion on genome 418
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttatatatag
tRNA gene sequence 
GGAGAGGTGGCCGAGTTGGCTGAAGGCGCTCGCCTGCTAAGCGAGTAGACGGCTAATAAC
TGTCTCGCGGGTTCAAATCCCGCTCTCTCCGCCA
Downstream region at tRNA end position 
tttaactaaa
Secondary structure (Cloverleaf model)
>WENV180095173	Ser	GCT
                   g      GCCA tttaactaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C G C C C     A
    T T G A        G      | | | | |     A
  G         G C C G       G C G G G     C
  G           | | |                 T T
  C         A G G C
    T G A          G     TAGACGGCTAATAACTGTCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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