The detailed information of tRNA gene sequence


Sequence ID>WENV180095180
Genome IDMTBK01053710
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 4140
End posion on genome 4228
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcacttgatg
tRNA gene sequence 
GGAGGGGTGTCCGAGCGGTTTATGGAGCCGGTCTTGAAAACCGGTGTCTCAGAAATGGGC
CGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
taattcgcaa
Secondary structure (Cloverleaf model)
>WENV180095180	Ser	TGA
                   g      GCCA taattcgcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G       + | | |                 T T
    T       T G G A
      T T A        G     TGTCTCAGAAATGGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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