The detailed information of tRNA gene sequence


Sequence ID>WENV180095182
Genome IDMTBK01053822
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 623
End posion on genome 533
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tgcccggcac
tRNA gene sequence 
GGAGATGTACCGAAGTGGCCATAACGGGGCGCTCTCGAAAAGCGTTTGTCGGGTGACCGG
CACGAGGGTTCGAATCCCTCCGCCTTTACCA
Downstream region at tRNA end position 
aacacgaaac
Secondary structure (Cloverleaf model)
>WENV180095182	Ser	CGA
                   c      ACCA aacacgaaac
                     G + T
                     G + T
                     A - T
                     G - C
                     A   C
                     T + G
                     G - C          T A
                    T     C T C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G A G G G     C
  C           | | |                 T T
  C         A C G G
    A T A          G     TTGTCGGGTGACCGGCAC
                    G + T
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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