The detailed information of tRNA gene sequence


Sequence ID>WENV180095186
Genome IDMTBK01054575
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 285
End posion on genome 356
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tgttgtttga
tRNA gene sequence 
CGCGGGGTAGAGCAGTGGAAGCTCGTCAGGCTCATAACCTGGAGGTCGTCGGTTCGAATC
CGACCCCCGCAAttt
Downstream region at tRNA end position 
gttttttaat
Secondary structure (Cloverleaf model)
>WENV180095186	fMet	CAT
                   a      Attt gttttttaat
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A G C C     A
        G A        A      | | | | |     G
      T     C G A G       G T C G G     C
      G     | | | |                 T T
      G     G C T C
        A A        G     AGGTC
                    T + G
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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