The detailed information of tRNA gene sequence


Sequence ID>WENV180095188
Genome IDMTBK01054789
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 34892
End posion on genome 34807
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcttgcatgc
tRNA gene sequence 
GGAGAGGTAGCCTAATTGGTAAGGCAGTAGTCTTGAAAACTACCGCGGGTAGCCGCTTGC
AGGTTCGAGTCCTGTCCTCTCCGCCA
Downstream region at tRNA end position 
tctatctccc
Secondary structure (Cloverleaf model)
>WENV180095188	Ser	TGA
                   c      GCCA tctatctccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T G
                    T     T G T C C     A
      T A A        A      + | | | |     G
    T       T C C G       G C A G G     C
    G       | | | |                 T T
    G       A G G C
      T A          A     CGCGGGTAGCCGCTT
                    G - C
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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