The detailed information of tRNA gene sequence


Sequence ID>WENV180095192
Genome IDMTBK01055007
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 465
End posion on genome 539
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aacagactgg
tRNA gene sequence 
GGCGGCATAGCCAAGTGGTAAGGCGACGGTCTGCAAAACCGTTATTCACCGGTTCAAATC
CGGTTGCCGCCTCCA
Downstream region at tRNA end position 
gcttttccag
Secondary structure (Cloverleaf model)
>WENV180095192	Cys	GCA
                   g      TCCA gcttttccag
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     T G G C C     A
        G A        A      | | | | |     A
      T     A C C G       A C C G G     C
      G       | | |                 T T
      G     A G G C
        T A        G     TATTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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