The detailed information of tRNA gene sequence


Sequence ID>WENV180095195
Genome IDMTBK01055021
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 50846
End posion on genome 50922
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
acaagcttat
tRNA gene sequence 
CGCGGGGTGGAGCAGTCCGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGCAGGTTCAAA
TCCTGTCCCCGCAACCA
Downstream region at tRNA end position 
atctttgatt
Secondary structure (Cloverleaf model)
>WENV180095195	fMet	CAT
                   t      ACCA atctttgatt
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     A
    C       C G A G       G C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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