The detailed information of tRNA gene sequence


Sequence ID>WENV180095196
Genome IDMTBK01055021
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 50998
End posion on genome 51073
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ggaattatta
tRNA gene sequence 
GGGGATGTAGCTCAATTGGCAGAGCACCTGGTTTGCAACCAGGGGGTCGCAGGTTCGACT
CCTGTCATCTCCACCA
Downstream region at tRNA end position 
ctttctcgaa
Secondary structure (Cloverleaf model)
>WENV180095196	Ala	TGC
                   a      ACCA ctttctcgaa
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          T C
                    T     T G T C C     A
      T A A        A      + | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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