The detailed information of tRNA gene sequence


Sequence ID>WENV180095199
Genome IDMTBK01055205
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2635
End posion on genome 2562
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
gcagcccaat
tRNA gene sequence 
GCCTTCTTAGCTCAGTCGGTAGAGCAGCTCATTCGTAATGAGCAGGTCGCGGGTTCGAGT
CCCGTGGAAGGCTCaa
Downstream region at tRNA end position 
aaacaacgtg
Secondary structure (Cloverleaf model)
>WENV180095199	Thr	CGT
                   t      TCaa aaacaacgtg
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A
                     C - G
                     T + G          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G - C
                    C - G
                    T - A
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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