The detailed information of tRNA gene sequence


Sequence ID>WENV180095204
Genome IDMTBK01055242
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 118
End posion on genome 42
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
atcgtcgcat
tRNA gene sequence 
GGGCCTTTAGCTCAGTTGGTTAGAGCAACCGGCTCATAACCGGTCGGTCCCGGGTTCGAG
TCCCTGAAGGCCCACCA
Downstream region at tRNA end position 
gacgcacttt
Secondary structure (Cloverleaf model)
>WENV180095204	Ile2	CAT
                   t      ACCA gacgcacttt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A          T G
                    T     G T C C C     A
      T G A        A      |   | | |     G
    T       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     CGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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