The detailed information of tRNA gene sequence


Sequence ID>WENV180095218
Genome IDMTBK01056610
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 437
End posion on genome 364
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
agtccctaca
tRNA gene sequence 
GGGCCCGTAGCATAGCTGGTGGTGCACCCGGCTGATAACCGGGAGGTCGTGCGTTCGAAT
CGCATCGGGCCCACtg
Downstream region at tRNA end position 
tttcttatcc
Secondary structure (Cloverleaf model)
>WENV180095218	Ile	GAT
                   a      ACtg tttcttatcc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T A C G C     A
      C G A        A      + | | | |     G
    T       T A C G       G T G C G     C
    G       + | | |                 T T
    G       G T G C
      T G          A     AGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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