The detailed information of tRNA gene sequence


Sequence ID>WENV180095219
Genome IDMTBK01056622
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 179
End posion on genome 256
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
tctaagaagt
tRNA gene sequence 
GGGTGATTAGCTCAGTTTGGTTAGAGTGCTACGTTGACATCGTAGAGGTCACTGGTTCAA
TTCCAGTATCACCCACCA
Downstream region at tRNA end position 
taaatttata
Secondary structure (Cloverleaf model)
>WENV180095219	Val	GAC
                   t      ACCA taaatttata
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A          T T
                    T     T G A C C     A
    T T G A        A      | | | | |     A
  T         C T C G       A C T G G     C
  G         | | | +                 T T
  G         G A G T
    T T A          G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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