The detailed information of tRNA gene sequence


Sequence ID>WENV180095220
Genome IDMTBK01056622
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 268
End posion on genome 344
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aaatttatat
tRNA gene sequence 
GGGTGATTAGCTCAGTTGGTTAGAGTGCTACGTTCACATCGTAGAGGCCACTGGTTCGAG
TCCAGTATCACCCACCA
Downstream region at tRNA end position 
catcattatc
Secondary structure (Cloverleaf model)
>WENV180095220	Val	CAC
                   t      ACCA catcattatc
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A          T G
                    T     T G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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