The detailed information of tRNA gene sequence


Sequence ID>WENV180095240
Genome IDMTBK01057880
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 368
End posion on genome 441
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aaaatatcag
tRNA gene sequence 
CGGGGCGTAGCGCAGCTTGGTAGCGCATCTGGTTTGGGACCAGAGGGCCGCGGGTTCAAA
TCCTGCCGCCCCGAttc
Downstream region at tRNA end position 
taataatgta
Secondary structure (Cloverleaf model)
>WENV180095240	Pro	TGG
                   g      Attc taataatgta
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G T C C     A
      C G A        A      | | + | |     A
    T       C G C G       G C G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGCC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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