The detailed information of tRNA gene sequence


Sequence ID>WENV180095246
Genome IDMTBK01058433
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 141
End posion on genome 52
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tcatactcac
tRNA gene sequence 
GGAGAGGTGACAGAGTGGCCGAATGTGGCGGTCTCGAAAACCGTTGGGCGTGCAAACGTC
CCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gttaccaaca
Secondary structure (Cloverleaf model)
>WENV180095246	Ser	CGA
                   c      GCCA gttaccaaca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G A C A       G T G G G     C
    G         | | |                 T T
    C       A T G T
      C G A        G     TGGGCGTGCAAACGTCCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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