The detailed information of tRNA gene sequence


Sequence ID>WENV180095253
Genome IDMTBK01058662
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 443
End posion on genome 520
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gacgcaactg
tRNA gene sequence 
CGGGGTGTAGCGCAGCCCGGTTAGCGCACTGGTTTTGGGAACCAGGAGTCGGAGGTTCGA
ATCCTCTCACCCCGACCA
Downstream region at tRNA end position 
caatatttat
Secondary structure (Cloverleaf model)
>WENV180095253	Pro	TGG
                   g      ACCA caatatttat
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
    C C G A        A      + | | | |     G
  C         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          A     GAGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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