The detailed information of tRNA gene sequence


Sequence ID>WENV180095281
Genome IDMTBK01060639
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 448
End posion on genome 375
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ccaaaagctg
tRNA gene sequence 
CGGGGCGTAGCGTAGTGGCTAGCGCGCCTGCTTTGGGAGCAGGAGATCGGGAGTTCGAGT
CTCCCCGCCCCGACaa
Downstream region at tRNA end position 
gttgcacccg
Secondary structure (Cloverleaf model)
>WENV180095281	Pro	TGG
                   g      ACaa gttgcacccg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C C C T C     A
      T G A        A      | | | | |     G
    G       T G C G       G G G A G     C
    G       + | | |                 T T
    C       G C G C
      T A          G     AGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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