The detailed information of tRNA gene sequence


Sequence ID>WENV180095288
Genome IDMTBK01060872
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 3626
End posion on genome 3552
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tgcagccccc
tRNA gene sequence 
GGTCCGGTAGCTCAGTTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCGTGGGTTCGAC
TCCCGCCCGGATCACaa
Downstream region at tRNA end position 
gcaaaaagca
Secondary structure (Cloverleaf model)
>WENV180095288	Arg	TCT
                   c      ACaa gcaaaaagca
                     G - C
                     G + T
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C          T C
                    T     C G C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    A - T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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