The detailed information of tRNA gene sequence


Sequence ID>WENV180095289
Genome IDMTBK01060875
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 415
End posion on genome 340
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
cctaatatat
tRNA gene sequence 
GCGCTAATAGCTCAGTTGGTAGAGCAGCTGACTCTTAATCAGCGGGTCCTGGGTTCGAGT
CCCCGTTAGCGCACCA
Downstream region at tRNA end position 
tagccgtctc
Secondary structure (Cloverleaf model)
>WENV180095289	Lys	CTT
                   t      ACCA tagccgtctc
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     A - T
                     A - T          T G
                    T     G C C C C     A
      T G A        A      |   | | |     G
    T       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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