The detailed information of tRNA gene sequence


Sequence ID>WENV180095290
Genome IDMTBK01060920
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 300
End posion on genome 225
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
atacagtcgt
tRNA gene sequence 
GGGGCTATGGCGCAACTGGGAGCGCGCTTGAATGGCATTCAAGAGGTCGAGGGTTCGAGT
CCCTCTAGCTCCACCA
Downstream region at tRNA end position 
ataccgaaaa
Secondary structure (Cloverleaf model)
>WENV180095290	Ala	GGC
                   t      ACCA ataccgaaaa
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          T G
                    T     C T C C C     A
      C A A        G      | | | | |     G
    T       C G C G       G A G G G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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