The detailed information of tRNA gene sequence


Sequence ID>WENV180095303
Genome IDMTBK01061247
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1078
End posion on genome 988
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccgtccccgc
tRNA gene sequence 
GGAGGGATGGATGAGCGGTTTAAGTCGCACGCCTGGAAAGCGTGTGGGGGTTAACAGCCC
CCCGCGGGTTCGAATCCCGCTCCCTCCGCCA
Downstream region at tRNA end position 
ggtgcctgcg
Secondary structure (Cloverleaf model)
>WENV180095303	Ser	GGA
                   c      GCCA ggtgcctgcg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G T A G       G C G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TGGGGGTTAACAGCCCCCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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