The detailed information of tRNA gene sequence


Sequence ID>WENV180095311
Genome IDMTBK01061784
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1788
End posion on genome 1714
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
cctttgaatg
tRNA gene sequence 
GTGGGTGTAGTTCAATGGCAGAGCACCGGATTGTGGTTCCGGGCGTTGGGGGTTCGAGTC
CCCTCACCCACCCCA
Downstream region at tRNA end position 
tcccatggat
Secondary structure (Cloverleaf model)
>WENV180095311	His	GTG
                   g      CCCA tcccatggat
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T C C C C     A
        A A        A      + | | | |     G
      T     C T T G       G G G G G     C
      G     | | + |                 T T
      G     G A G C
        C A        A     GCGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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