The detailed information of tRNA gene sequence


Sequence ID>WENV180095312
Genome IDMTBK01061906
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 440
End posion on genome 516
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ttaaagtttt
tRNA gene sequence 
CGGGGTGTAGCGCAGTCGGCTAGCGCGCGGGATTCGGGTTCCCGAGGTCGGAGGTTCAAG
TCCTCTCACCCCGACCA
Downstream region at tRNA end position 
gattaaattt
Secondary structure (Cloverleaf model)
>WENV180095312	Pro	CGG
                   t      ACCA gattaaattt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T C T C C     A
      T G A        A      + | | | |     A
    C       C G C G       G G A G G     C
    G       | | | |                 T T
    G       G C G C
      C T A        G     AGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  T       T
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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