The detailed information of tRNA gene sequence


Sequence ID>WENV180095323
Genome IDMTBK01062375
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 10629
End posion on genome 10543
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
actttcccgt
tRNA gene sequence 
GCCGAAGTGGCGGAATTGGTAGACGCGCTAGGTTCAGGGTCTAGTGGGTGTACGCCTGTG
CTGGTTCAAATCCAGTCTTCGGCACCA
Downstream region at tRNA end position 
ttagaaaata
Secondary structure (Cloverleaf model)
>WENV180095323	Leu	CAG
                   t      ACCA ttagaaaata
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T G A C C     A
      T A A        G      + | | | |     A
    T       G G C G       G C T G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGGGTGTACGCCTGT
                    C - G
                    T - A
                    A - T
                    G - C
                    G + T
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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