The detailed information of tRNA gene sequence


Sequence ID>WENV180095324
Genome IDMTBK01062444
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 743
End posion on genome 658
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aagcagtttT
tRNA gene sequence 
GCCGAGGTAGTCTAGTCCGGGAAGGCGGTGGTCTCGAAAACCACTGGTGGTAACACCTCG
GGAGTTCAAATCTCCCCTTCGGCGTtt
Downstream region at tRNA end position 
ctattttaga
Secondary structure (Cloverleaf model)
>WENV180095324	Ser	CGA
                   T      GTtt ctattttaga
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C C C T C     A
      T G A        A      | | | | |     A
    C       T C T G       G G G A G     C
    C       | | + |                 T T
    G       A G G C
      G G A        G     TGGTGGTAACACCTC
                    G - C
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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