The detailed information of tRNA gene sequence


Sequence ID>WENV180095335
Genome IDMTBK01063284
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2060
End posion on genome 2135
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ttaagtgtaa
tRNA gene sequence 
GCTCAAGTAGCTCAGTAGGTAGAGCACCTCCTTGGTAAGGAGGAGGTCACCGGTTCAAGT
CCGGTCTTGAGCTCCA
Downstream region at tRNA end position 
cttttgaagt
Secondary structure (Cloverleaf model)
>WENV180095335	Thr	GGT
                   a      TCCA cttttgaagt
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T
                     A - T
                     G - C          T G
                    T     T G G C C     A
      T G A        A      | | | | |     A
    A       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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