The detailed information of tRNA gene sequence


Sequence ID>WENV180095337
Genome IDMTBK01063464
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 7799
End posion on genome 7709
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgaaagacac
tRNA gene sequence 
GGAGAGATGGTCGAGTTGGCTGAAGGCACCGGTCTTGAAAACCGGCGAGGATGCAAGTCC
TCCGCGGGTTCGAATCCCGCTCTCTCCGCCA
Downstream region at tRNA end position 
atatccctta
Secondary structure (Cloverleaf model)
>WENV180095337	Ser	TGA
                   c      GCCA atatccctta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
    T T G A        G      | | | | |     G
  G         G C T G       G C G G G     C
  G           | + |                 T T
  C         A G G C
    T G A          A     CGAGGATGCAAGTCCTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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