The detailed information of tRNA gene sequence


Sequence ID>WENV180095349
Genome IDMTBK01064172
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 298
End posion on genome 372
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gaaatgttgt
tRNA gene sequence 
GGGGCTGTGGCGCAGAGGGAGCGCGCTTCCTTGGCATGGAAGAGGCCGCGGGTTCAAGTC
CCGCCAGCTCCACCA
Downstream region at tRNA end position 
ttactttacc
Secondary structure (Cloverleaf model)
>WENV180095349	Ala	GGC
                   t      ACCA ttactttacc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     C G C C C     A
        G A        G      | | | | |     A
      A     C G C G       G C G G G     C
      G     | | | |                 T T
      G     G C G C
        G A        G     AGGCC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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