The detailed information of tRNA gene sequence


Sequence ID>WENV180095351
Genome IDMTBK01064177
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 219
End posion on genome 295
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
caaaagagct
tRNA gene sequence 
GGGCGTATAGCTCAGTTGGTTAGAGCGTTACGTTGACATCGTAAAGGCCTCCTGTTCGAG
TCAGGATACGCCCACCA
Downstream region at tRNA end position 
aattaaaata
Secondary structure (Cloverleaf model)
>WENV180095351	Val	GAC
                   t      ACCA aattaaaata
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     A - T          T G
                    T     A G G A C     A
      T G A        A      | | | | |     G
    T       C T C G       T C C T G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    T - A
                    T - A
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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