The detailed information of tRNA gene sequence


Sequence ID>WENV180095353
Genome IDMTBK01064177
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 870
End posion on genome 943
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gatgatttac
tRNA gene sequence 
GGGCGGTTAGCTCAATTGGCAGAGCACTTCGTTTACACCGAAGGGGTTAGGGGTTCAAGT
CCCTTACCGCCCACta
Downstream region at tRNA end position 
tatgccgagg
Secondary structure (Cloverleaf model)
>WENV180095353	Val	TAC
                   c      ACta tatgccgagg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T G
                    T     T T C C C     A
      T A A        A      | + | | |     A
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTT
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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