The detailed information of tRNA gene sequence


Sequence ID>WENV180095355
Genome IDMTBK01064425
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2807
End posion on genome 2732
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gcttcacttc
tRNA gene sequence 
GGGCGCTTAGCTCAGTTGGTTAGAGCGCACGGTTCACATCCGTGAGGTCACTGGTTCGAG
TCCAGCAGTGCCCACCt
Downstream region at tRNA end position 
ttcctaatag
Secondary structure (Cloverleaf model)
>WENV180095355	Val	CAC
                   c      ACCt ttcctaatag
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     C - G
                     T - A          T G
                    T     C G A C C     A
      T G A        A        | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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