The detailed information of tRNA gene sequence


Sequence ID>WENV180095357
Genome IDMTBK01064642
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 469
End posion on genome 396
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tataacgttc
tRNA gene sequence 
GGGCGGATAGCTCAGTTGGTTAGAGCGCATCTTTTACACAGATGAGGCCGCAGGTTCGAG
TCCTGTTCTGCCCAttt
Downstream region at tRNA end position 
tgtatttaaa
Secondary structure (Cloverleaf model)
>WENV180095357	Val	TAC
                   c      Attt tgtatttaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     G - C
                     A - T          T G
                    T     T G T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    C - G
                    A - T
                    T - A
                    C - G
                    T - A
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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